USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: LA_HUMAN USC-OGP 2-DE database:  LA_HUMAN LA_HUMAN General information about the entry View entry in simple text format Entry name LA_HUMAN Primary accession number P05455 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Lupus La protein; AltName: Full=La autoantigen; AltName: Full=La ribonucleoprotein; AltName: Full=Sjoegren syndrome type B antigen; Short=SS-B;. Gene name Name=SSB Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1143: pI=6.86; Mw=59744 Cross-references UniProtKB/Swiss-Prot P05455; LA_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name LA_HUMAN Primary accession number P05455 Secondary accession number(s) Q15367 Q53XJ4 Sequence was last modified on  July 1, 1989 (version 2) Annotations were last modified on  March 15, 2017 (version 202) Name and origin of the protein Description RecName: Full=Lupus La protein; AltName: Full=La autoantigen; AltName: Full=La ribonucleoprotein; AltName: Full=Sjoegren syndrome type B antigen; Short=SS-B; Gene name Name=SSB Encoded on Name=SSB Keywords 3D-structure; Acetylation; Complete proteome; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; RNA-binding; Systemic lupus erythematosus. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL X13697; CAA31985.1; -; mRNA EMBL J04205; AAA51885.1; -; mRNA EMBL BT009862; AAP88864.1; -; mRNA EMBL AB451228; BAG70042.1; -; mRNA EMBL AC009967; AAY14868.1; -; Genomic_DNA EMBL CH471058; EAX11258.1; -; Genomic_DNA EMBL CH471058; EAX11259.1; -; Genomic_DNA EMBL BC001289; AAH01289.1; -; mRNA EMBL BC020818; AAH20818.1; -; mRNA EMBL M20328; AAA36577.1; -; mRNA CCDS CCDS2237.1; -; . PIR A31888; A31888; . RefSeq NP_001281074.1; NM_001294145.1; . RefSeq NP_003133.1; NM_003142.4; . UniGene Hs.632535; -; . PDB 1OWX; NMR; -; A=225-334 PDB 1S79; NMR; -; A=105-202 PDB 1S7A; NMR; -; A=1-103 PDB 1YTY; X-ray; 2.29 A; A/B=1-194 PDB 1ZH5; X-ray; 1.85 A; A/B=1-194 PDB 2VOD; X-ray; 2.10 A; A/B=4-194 PDB 2VON; X-ray; 2.10 A; A/B=4-194 PDB 2VOO; X-ray; 1.80 A; A/B=4-194 PDB 2VOP; X-ray; 2.80 A; A=4-194 PDBsum 1OWX; -; . PDBsum 1S79; -; . PDBsum 1S7A; -; . PDBsum 1YTY; -; . PDBsum 1ZH5; -; . PDBsum 2VOD; -; . PDBsum 2VON; -; . PDBsum 2VOO; -; . PDBsum 2VOP; -; . DisProt DP00229; -; . ProteinModelPortal P05455; -; . SMR P05455; -; . BioGrid 112619; 100; . DIP DIP-29750N; -; . IntAct P05455; 37; . MINT MINT-5002383; -; . STRING 9606.ENSP00000260956; -; . ChEMBL CHEMBL2040701; -; . iPTMnet P05455; -; . PhosphoSitePlus P05455; -; . SwissPalm P05455; -; . BioMuta SSB; -; . DMDM 125985; -; . EPD P05455; -; . MaxQB P05455; -; . PaxDb P05455; -; . PeptideAtlas P05455; -; . PRIDE P05455; -; . DNASU 6741; -; . Ensembl ENST00000260956; ENSP00000260956; ENSG00000138385; . Ensembl ENST00000409333; ENSP00000386636; ENSG00000138385; . GeneID 6741; -; . KEGG hsa:6741; -; . UCSC uc002ufk.4; human; . CTD 6741; -; . DisGeNET 6741; -; . GeneCards SSB; -; . HGNC HGNC:11316; SSB; . HPA CAB004643; -; . HPA HPA017287; -; . MIM 109090; gene; . neXtProt NX_P05455; -; . OpenTargets ENSG00000138385; -; . PharmGKB PA36140; -; . eggNOG ENOG410IQXQ; Eukaryota; . eggNOG COG5193; LUCA; . GeneTree ENSGT00830000128380; -; . HOGENOM HOG000006947; -; . HOVERGEN HBG001407; -; . InParanoid P05455; -; . KO K11090; -; . OMA TPDQKYK; -; . OrthoDB EOG091G0K95; -; . PhylomeDB P05455; -; . TreeFam TF314476; -; . Reactome R-HSA-73980; RNA Polymerase III Transcription Termination; . Reactome R-HSA-749476; RNA Polymerase III Abortive And Retractive Initiation; . SIGNOR P05455; -; . ChiTaRS SSB; human; . EvolutionaryTrace P05455; -; . GeneWiki Sjogren_syndrome_antigen_B; -; . GenomeRNAi 6741; -; . PMAP-CutDB P05455; -; . PRO PR:P05455; -; . Proteomes UP000005640; Chromosome 2; . Bgee ENSG00000138385; -; . CleanEx HS_SSB; -; . ExpressionAtlas P05455; baseline and differential; . Genevisible P05455; HS; . GO GO:0030529; C:intracellular ribonucleoprotein complex; TAS:ProtInc; . GO GO:0000784; C:nuclear chromosome; telomeric region; IDA:BHF-UCL GO GO:0005634; C:nucleus; IDA:AgBase; . GO GO:0003729; F:mRNA binding; TAS:ProtInc; . GO GO:0000166; F:nucleotide binding; IEA:InterPro; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0000049; F:tRNA binding; TAS:ProtInc; . GO GO:0008334; P:histone mRNA metabolic process; TAS:ProtInc; . GO GO:0075522; P:IRES-dependent viral translational initiation; IDA:UniProtKB; . GO GO:1903608; P:protein localization to cytoplasmic stress granule; IDA:AgBase; . GO GO:0006400; P:tRNA modification; TAS:ProtInc; . Gene3D 1.10.10.10; -; 1; . Gene3D 3.30.70.330; -; 2; . InterPro IPR014886; La_RRM; . InterPro IPR002344; Lupus_La; . InterPro IPR006630; Lupus_La_RNA-bd; . InterPro IPR012677; Nucleotide-bd_a/b_plait; . InterPro IPR000504; RRM_dom; . InterPro IPR011991; WHTH_DNA-bd_dom; . Pfam PF05383; La; 1; . Pfam PF00076; RRM_1; 1; . Pfam PF08777; RRM_3; 1; . PRINTS PR00302; LUPUSLA; . SMART SM00715; LA; 1; . SMART SM00360; RRM; 1; . SUPFAM SSF46785; SSF46785; 1; . SUPFAM SSF54928; SSF54928; 2; . PROSITE PS50961; HTH_LA; 1; . PROSITE PS50102; RRM; 1; .

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• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
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